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Hadoop mapreduce appliction을 실행시 "is running beyond virtual memory limits" 오류 발생시 조치사항

총관리자 2017.05.04 10:30 조회 수 : 16896

1. application실행하면 "YarnApplicationState: ACCEPTED: waiting for AM container to be allocated, launched and register with RM"가 UI에 표시되면서 job이 hang이 걸리면서 진행이 되지 않는 경우가 있는데 그때는 yarn-site.xml의 "yarn.nodemanager.resource.memory-mb"의 값을 매우 크게 지정하여 appliction을 실행하면 hang은 걸리지 않으나 아래의 2번 항목의 문제가 발생한다. 
(yarn.nodemanager.vmem-check-enabled, yarn.nodemanager.vmem-pmem-ratio의 설정값이 없는 경우)

2. hadoop application을 실행할때 "Container [pid=19278,containerID=container_1493858350369_0001_01_000008] is running beyond virtual memory limits. Current usage: 636.1 MB of 1 GB physical memory used; 2.4 GB of 2.1 GB virtual memory used. Killing container." 같은 오류가 길생되면서 job이 실패하는 경우가 있는데 이것은 application이 가용한 가상메모리 보다 더 많은 메모리를 사용할때 발생하는 문제이다. 그래서 hadoop이 가상메모리 제한을 체크하지 않도록 하고 많은 메모리를 사용하는 appliction을 위해서 가상메모리와 물리메모리 비율을 높게 설정해 준다.(yarn-site.xml에 설정해줌)
  <property>
    <name>yarn.nodemanager.vmem-check-enabled</name>
    <value>false</value>
  </property>
  <property>
    <name>yarn.nodemanager.vmem-pmem-ratio</name>
    <value>4</value>
  </property>

------------------------------------------오류내용-----------------------
root@gsda1:~/hadoop/etc/hadoop# yarn jar $HOME/hadoop/share/hadoop/mapreduce/hadoop-mapreduce-examples-2.8.0.jar wordcount in out-6
SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/share/hadoop/common/lib/slf4j-log4j12-1.7.10.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/svc/apps/gsda/bin/hadoop/apache-hive-2.1.1-bin/lib/log4j-slf4j-impl-2.4.1.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
17/05/04 09:41:09 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
17/05/04 09:41:10 WARN ipc.Client: Failed to connect to server: gsda1/104.251.212.146:8032: retries get failed due to exceeded maximum allowed retries number: 0
java.net.ConnectException: Connection refused
        at sun.nio.ch.SocketChannelImpl.checkConnect(Native Method)
        at sun.nio.ch.SocketChannelImpl.finishConnect(SocketChannelImpl.java:717)
        at org.apache.hadoop.net.SocketIOWithTimeout.connect(SocketIOWithTimeout.java:206)
        at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:531)
        at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:495)
        at org.apache.hadoop.ipc.Client$Connection.setupConnection(Client.java:681)
        at org.apache.hadoop.ipc.Client$Connection.setupIOstreams(Client.java:777)
        at org.apache.hadoop.ipc.Client$Connection.access$3500(Client.java:409)
        at org.apache.hadoop.ipc.Client.getConnection(Client.java:1542)
        at org.apache.hadoop.ipc.Client.call(Client.java:1373)
        at org.apache.hadoop.ipc.Client.call(Client.java:1337)
        at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:227)
        at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
        at com.sun.proxy.$Proxy13.getNewApplication(Unknown Source)
        at org.apache.hadoop.yarn.api.impl.pb.client.ApplicationClientProtocolPBClientImpl.getNewApplication(ApplicationClientProtocolPBClientImpl.java:258)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:398)
        at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:163)
        at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:155)
        at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeOnce(RetryInvocationHandler.java:95)
        at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:335)
        at com.sun.proxy.$Proxy14.getNewApplication(Unknown Source)
        at org.apache.hadoop.yarn.client.api.impl.YarnClientImpl.getNewApplication(YarnClientImpl.java:242)
        at org.apache.hadoop.yarn.client.api.impl.YarnClientImpl.createApplication(YarnClientImpl.java:250)
        at org.apache.hadoop.mapred.ResourceMgrDelegate.getNewJobID(ResourceMgrDelegate.java:193)
        at org.apache.hadoop.mapred.YARNRunner.getNewJobID(YARNRunner.java:241)
        at org.apache.hadoop.mapreduce.JobSubmitter.submitJobInternal(JobSubmitter.java:155)
        at org.apache.hadoop.mapreduce.Job$11.run(Job.java:1341)
        at org.apache.hadoop.mapreduce.Job$11.run(Job.java:1338)
        at java.security.AccessController.doPrivileged(Native Method)
        at javax.security.auth.Subject.doAs(Subject.java:422)
        at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1807)
        at org.apache.hadoop.mapreduce.Job.submit(Job.java:1338)
        at org.apache.hadoop.mapreduce.Job.waitForCompletion(Job.java:1359)
        at org.apache.hadoop.examples.WordCount.main(WordCount.java:87)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.apache.hadoop.util.ProgramDriver$ProgramDescription.invoke(ProgramDriver.java:71)
        at org.apache.hadoop.util.ProgramDriver.run(ProgramDriver.java:144)
        at org.apache.hadoop.examples.ExampleDriver.main(ExampleDriver.java:74)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.apache.hadoop.util.RunJar.run(RunJar.java:234)
        at org.apache.hadoop.util.RunJar.main(RunJar.java:148)
17/05/04 09:41:10 INFO client.ConfiguredRMFailoverProxyProvider: Failing over to rm2
17/05/04 09:41:12 INFO input.FileInputFormat: Total input files to process : 3
17/05/04 09:41:12 INFO mapreduce.JobSubmitter: number of splits:3
17/05/04 09:41:12 INFO mapreduce.JobSubmitter: Submitting tokens for job: job_1493858350369_0001
17/05/04 09:41:13 INFO impl.YarnClientImpl: Submitted application application_1493858350369_0001
17/05/04 09:41:13 INFO mapreduce.Job: The url to track the job: http://gsda2:8088/proxy/application_1493858350369_0001/
17/05/04 09:41:13 INFO mapreduce.Job: Running job: job_1493858350369_0001
17/05/04 09:41:21 INFO mapreduce.Job: Job job_1493858350369_0001 running in uber mode : false
17/05/04 09:41:21 INFO mapreduce.Job:  map 0% reduce 0%
17/05/04 09:41:27 INFO mapreduce.Job:  map 33% reduce 0%
17/05/04 09:41:29 INFO mapreduce.Job:  map 67% reduce 0%
17/05/04 09:41:30 INFO mapreduce.Job: Task Id : attempt_1493858350369_0001_m_000000_0, Status : FAILED
Container [pid=2161,containerID=container_1493858350369_0001_01_000002] is running beyond virtual memory limits. Current usage: 738.1 MB of 1 GB physical memory used; 2.4 GB of 2.1 GB virtual memory used. Killing container.
Dump of the process-tree for container_1493858350369_0001_01_000002 :
        |- PID PPID PGRPID SESSID CMD_NAME USER_MODE_TIME(MILLIS) SYSTEM_TIME(MILLIS) VMEM_USAGE(BYTES) RSSMEM_USAGE(PAGES) FULL_CMD_LINE
        |- 2165 2161 2161 2161 (java) 929 59 2580721664 188600 /usr/lib/jvm/java-8-oracle/bin/java -Djava.net.preferIPv4Stack=true -Dhadoop.metrics.log.level=WARN -Xmx819m -Djava.io.tmpdir=/hadoop/tmp/nm-local-dir/usercache/root/appcache/application_1493858350369_0001/container_1493858350369_0001_01_000002/tmp -Dlog4j.configuration=container-log4j.properties -Dyarn.app.container.log.dir=/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000002 -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA -Dhadoop.root.logfile=syslog org.apache.hadoop.mapred.YarnChild 104.251.212.191 43986 attempt_1493858350369_0001_m_000000_0 2 
        |- 2161 2159 2161 2161 (bash) 0 0 12861440 351 /bin/bash -c /usr/lib/jvm/java-8-oracle/bin/java -Djava.net.preferIPv4Stack=true -Dhadoop.metrics.log.level=WARN  -Xmx819m -Djava.io.tmpdir=/hadoop/tmp/nm-local-dir/usercache/root/appcache/application_1493858350369_0001/container_1493858350369_0001_01_000002/tmp -Dlog4j.configuration=container-log4j.properties -Dyarn.app.container.log.dir=/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000002 -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA -Dhadoop.root.logfile=syslog org.apache.hadoop.mapred.YarnChild 104.251.212.191 43986 attempt_1493858350369_0001_m_000000_0 2 1>/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000002/stdout 2>/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000002/stderr  

Container killed on request. Exit code is 143
Container exited with a non-zero exit code 143

17/05/04 09:41:36 INFO mapreduce.Job: Task Id : attempt_1493858350369_0001_m_000000_1, Status : FAILED
Container [pid=19183,containerID=container_1493858350369_0001_01_000007] is running beyond virtual memory limits. Current usage: 651.1 MB of 1 GB physical memory used; 2.4 GB of 2.1 GB virtual memory used. Killing container.
Dump of the process-tree for container_1493858350369_0001_01_000007 :
        |- PID PPID PGRPID SESSID CMD_NAME USER_MODE_TIME(MILLIS) SYSTEM_TIME(MILLIS) VMEM_USAGE(BYTES) RSSMEM_USAGE(PAGES) FULL_CMD_LINE
        |- 19187 19183 19183 19183 (java) 646 48 2581504000 166331 /usr/lib/jvm/java-8-oracle/bin/java -Djava.net.preferIPv4Stack=true -Dhadoop.metrics.log.level=WARN -Xmx819m -Djava.io.tmpdir=/hadoop/tmp/nm-local-dir/usercache/root/appcache/application_1493858350369_0001/container_1493858350369_0001_01_000007/tmp -Dlog4j.configuration=container-log4j.properties -Dyarn.app.container.log.dir=/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000007 -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA -Dhadoop.root.logfile=syslog org.apache.hadoop.mapred.YarnChild 104.251.212.191 43986 attempt_1493858350369_0001_m_000000_1 7 
        |- 19183 19181 19183 19183 (bash) 0 0 12861440 351 /bin/bash -c /usr/lib/jvm/java-8-oracle/bin/java -Djava.net.preferIPv4Stack=true -Dhadoop.metrics.log.level=WARN  -Xmx819m -Djava.io.tmpdir=/hadoop/tmp/nm-local-dir/usercache/root/appcache/application_1493858350369_0001/container_1493858350369_0001_01_000007/tmp -Dlog4j.configuration=container-log4j.properties -Dyarn.app.container.log.dir=/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000007 -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA -Dhadoop.root.logfile=syslog org.apache.hadoop.mapred.YarnChild 104.251.212.191 43986 attempt_1493858350369_0001_m_000000_1 7 1>/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000007/stdout 2>/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000007/stderr  

Container killed on request. Exit code is 143
Container exited with a non-zero exit code 143

17/05/04 09:41:42 INFO mapreduce.Job: Task Id : attempt_1493858350369_0001_m_000000_2, Status : FAILED
Container [pid=19278,containerID=container_1493858350369_0001_01_000008] is running beyond virtual memory limits. Current usage: 636.1 MB of 1 GB physical memory used; 2.4 GB of 2.1 GB virtual memory used. Killing container.
Dump of the process-tree for container_1493858350369_0001_01_000008 :
        |- PID PPID PGRPID SESSID CMD_NAME USER_MODE_TIME(MILLIS) SYSTEM_TIME(MILLIS) VMEM_USAGE(BYTES) RSSMEM_USAGE(PAGES) FULL_CMD_LINE
        |- 19278 19276 19278 19278 (bash) 0 0 12861440 351 /bin/bash -c /usr/lib/jvm/java-8-oracle/bin/java -Djava.net.preferIPv4Stack=true -Dhadoop.metrics.log.level=WARN  -Xmx819m -Djava.io.tmpdir=/hadoop/tmp/nm-local-dir/usercache/root/appcache/application_1493858350369_0001/container_1493858350369_0001_01_000008/tmp -Dlog4j.configuration=container-log4j.properties -Dyarn.app.container.log.dir=/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000008 -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA -Dhadoop.root.logfile=syslog org.apache.hadoop.mapred.YarnChild 104.251.212.191 43986 attempt_1493858350369_0001_m_000000_2 8 1>/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000008/stdout 2>/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000008/stderr  
        |- 19282 19278 19278 19278 (java) 693 47 2579701760 162501 /usr/lib/jvm/java-8-oracle/bin/java -Djava.net.preferIPv4Stack=true -Dhadoop.metrics.log.level=WARN -Xmx819m -Djava.io.tmpdir=/hadoop/tmp/nm-local-dir/usercache/root/appcache/application_1493858350369_0001/container_1493858350369_0001_01_000008/tmp -Dlog4j.configuration=container-log4j.properties -Dyarn.app.container.log.dir=/svc/apps/gsda/bin/hadoop/hadoop-2.8.0/logs/userlogs/application_1493858350369_0001/container_1493858350369_0001_01_000008 -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA -Dhadoop.root.logfile=syslog org.apache.hadoop.mapred.YarnChild 104.251.212.191 43986 attempt_1493858350369_0001_m_000000_2 8 

Container killed on request. Exit code is 143
Container exited with a non-zero exit code 143

17/05/04 09:41:44 INFO mapreduce.Job:  map 67% reduce 22%
17/05/04 09:41:49 INFO mapreduce.Job:  map 100% reduce 100%
17/05/04 09:41:49 INFO mapreduce.Job: Job job_1493858350369_0001 failed with state FAILED due to: Task failed task_1493858350369_0001_m_000000
Job failed as tasks failed. failedMaps:1 failedReduces:0

17/05/04 09:41:50 INFO mapreduce.Job: Counters: 41
        File System Counters
                FILE: Number of bytes read=0
                FILE: Number of bytes written=7666113
                FILE: Number of read operations=0
                FILE: Number of large read operations=0
                FILE: Number of write operations=0
                HDFS: Number of bytes read=4036044
                HDFS: Number of bytes written=0
                HDFS: Number of read operations=6
                HDFS: Number of large read operations=0
                HDFS: Number of write operations=0
        Job Counters 
                Failed map tasks=4
                Killed map tasks=1
                Killed reduce tasks=1
                Launched map tasks=6
                Launched reduce tasks=1
                Other local map tasks=3
                Data-local map tasks=3
                Total time spent by all maps in occupied slots (ms)=28729
                Total time spent by all reduces in occupied slots (ms)=40216
                Total time spent by all map tasks (ms)=28729
                Total time spent by all reduce tasks (ms)=20108
                Total vcore-milliseconds taken by all map tasks=28729
                Total vcore-milliseconds taken by all reduce tasks=20108
                Total megabyte-milliseconds taken by all map tasks=29418496
                Total megabyte-milliseconds taken by all reduce tasks=41181184
        Map-Reduce Framework
                Map input records=29535
                Map output records=70611
                Map output bytes=7250146
                Map output materialized bytes=7382759
                Input split bytes=248
                Combine input records=70611
                Combine output records=67818
                Spilled Records=67818
                Failed Shuffles=0
                Merged Map outputs=0
                GC time elapsed (ms)=111
                CPU time spent (ms)=4610
                Physical memory (bytes) snapshot=1259335680
                Virtual memory (bytes) snapshot=5179203584
                Total committed heap usage (bytes)=1168113664
        File Input Format Counters 
                Bytes Read=4035796
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